Combine bulk single-chain TCR data with paired TCR data

This function...

Usage

combine_bulk_and_paired_data(alpha, beta, paired, meta)

Arguments

alpha

a dataframe with alpha chain bulk TCR data

beta

a dataframe with beta chain bulk TCR data

paired

a dataframe with paired chain TCR data

meta

either the sample name or a metadata data frame containing the sample name in the 'sample_id' column.

Value

a pairedTCRDataSet object

See also

Other data_processing: TIRTL_process(), add_single_chain_data(), clean_pairs(), filter_duplicate_tcrs(), filter_mait(), filter_nonfunctional_TCRs(), filter_short_cdr3s(), filter_v_alleles(), identify_non_functional_seqs(), identify_paired(), make_tcr_schema(), prep_for_tcrdist(), read_external_bulk(), read_external_paired(), remove_duplicates()