Add single-chain read counts/fractions to the paired TCR data
add_single_chain_data.Rd![[Deprecated]](figures/lifecycle-deprecated.svg)
This function has been deprecated because its functionality has been added to the load_tirtlseq() function
The add_single_chain_data() function adds read counts and proportions
from the single-chain pseudobulk data to the paired data frame for each sample
of a dataset.
Arguments
- data
a TIRTLseq dataset created by
load_tirtlseq()- verbose
(optional) whether to print progress of the function (default is TRUE).
Value
A TIRTLseq dataset object where the paired data frames for each sample have added columns for read counts and proportions from the single-chain pseudobulk data.
See also
Other deprecated:
identify_non_functional_seqs(),
identify_paired(),
process_TIRTLseq()